Download MendeleyPaaR2, the CI equivalent in Escherichia coli O157:H7 cryptic prophage CP-933P
Prolik-Kalinsek, M., Volkov, A., Loris, R.To be published.
8C3K
PaaR2 N-terminal domin in complex with nanobody 33
- PDB DOI: https://doi.org/10.2210/pdb8C3K/pdb
- Classification: DNA BINDING PROTEIN
- Organism(s): Escherichia coli O157:H7, Lama glama
- Expression System: Escherichia coli BL21(DE3)
- Mutation(s): No
- Deposited: 2022-12-26 Released: 2024-01-10
- Funding Organization(s): Research Foundation - Flanders (FWO)
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.75 Å
- R-Value Free: 0.233
- R-Value Work: 0.203
- R-Value Observed: 0.206
wwPDB Validation 3D Report Full Report
This is version 1.0 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Phage repressor protein CI | 74 | Escherichia coli O157:H7 | Mutation(s): 0 Gene Names: ECs_2279 |  | |
UniProt | |||||
Find proteins for Q8XAD6 (Escherichia coli O157:H7) Explore Q8XAD6 Go to UniProtKB: Q8XAD6 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q8XAD6 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 2 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Nanobody 33 | 117 | Lama glama | Mutation(s): 0 |  | |
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
Sequence AnnotationsExpand | |||||
| |||||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.75 Å
- R-Value Free: 0.233
- R-Value Work: 0.203
- R-Value Observed: 0.206
- Space Group: P 32 2 1
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 67.143 | α = 90 |
| b = 67.143 | β = 90 |
| c = 69.707 | γ = 120 |
| Software Name | Purpose |
|---|---|
| PHENIX | refinement |
| XDS | data reduction |
| XDS | data scaling |
| PHASER | phasing |
Entry History & Funding Information
Deposition Data
- Released Date: 2024-01-10 Deposition Author(s): Loris, R., Prolic-Kalinsek, M.
| Funding Organization | Location | Grant Number |
|---|---|---|
| Research Foundation - Flanders (FWO) | Belgium | G.0226.17N |
Revision History (Full details and data files)
- Version 1.0: 2024-01-10
Type: Initial release
